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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931959.1_cds_XP_016478595.1_70219
CDS Infomation

[gene=LOC107799965] [db_xref=GeneID:107799965] [protein=protein MICRORCHIDIA 6 isoform X2] [protein_id=XP_016478595.1] [location=join(6871..6946,7019..7094,8713..8791,9459..9587,11682..11780,11870..11971,12067..12213,13241..13333,14199..14250,14360..14471,14777..15072,16759..16868,18215..18288,21337..21379,21497..21607)] [gbkey=CDS]
Sequence

ATGGACCCAGAAGCCATACGTCGTTGTATGAGTTTTGGATTTTCGGATAAGAAGTCAACT
TCAGCTATTGGACAGTATGGAAATGGTTTTAAGACCAGTTCAATGAGACTTGGGGCAGAT
GTTATTGTCTTTAGCCGCTGCACAAAGAACAGGAAATTGACACAAAGCATTGGGCTTCTA
TCTCAGACATTTCTGTCCCGAGCGGGCCTTGACAGAATAGTGGTTCCTTTGATTGACTTT
GAGTTCAGTTCAGCAGCTGGAAAATGGAACTCGTTACATGGTGAACAGCATTTTGTGAGT
AACCTTTCCTTGTTGTTGCGCTGGTCTCCATTTGCAACAGAAGCAGAGCTTCTTAAGCAA
TTTGATGACATTGGTGATCATGGCACAAAGGTGATTGTCTACAATTTGTGGTTTAATGAT
GAAGGGAAAATGGAGCTCGACTTTGAGGCAGATCCTGAGGATATTCGTCTTTCAGGGGAT
GCAAACGATAAAGAGAAGAGTGGCTCTCGTATTTCAGCAAGTGACCTGCATCTTGCTAAC
CGTCTTCGTTACTCACTACGTGCATATTTATCAGTGTTGTACTTGCGGATCCCAGACAAC
TTCTGTATTCTGTTGCGTGGACGGATTGTTGAATGCCATAACATTGCTAAGGATCTCAAG
TATCCTGAATTTATCATGTATAAGCCTCAAACAGTTGGATTCAAAGAGGGTTCAGTCATT
ACTACAATTGGCTTCCTAAAGGAAGCTCCAGTGGTGAACGTTCATGGGTTCAATGTCTAC
CACAAAAATCGTTTGATACTGCCATTTTGGCATGTTGTAAGGTACTCTGATAGTAGAGGC
AGAGGAGTTGTTGGTGTTTTAGAAGCAAACTTTATTCAGCCAACTCATAATAAGCAGGAC
TTCGAGAAAACCCCTCTTTTTCAAAAGCTTGAAGTACGCCTAAAGGAGATGACATGGGAG
TACTGGGATTATCACTGCGGGCTCATTGGTTACCACCCAAAGAAAAAACCTCAGCGACCG
ATAACTCCTCAGGCTTCATCTGAATCTAGACAACAACATGGCACATATAAACCTGTTCTC
TTGGGTAAAAACTCCTTTAGTGCTGTTGGACCAATAACTCCTCAGGCTTCATTGGAATCT
AGGCAACAACATTGTTCATATAAACCTGTTTTCTTGGGTAAACACTCCTCTGGTGCTGTT
GGTTCAAACATTACAGTACGCGGAACTGTAACACCAGTCTTTCAAAATAACTCTAGACAA
GGAGCTTCAAAAAGGAAAGAAGCTGATCGTCCAATAGAACAGGAAAGCTTGAAACGGACA
GCTGGACTAGTAGTTGATTTAACTGGCGGTGGGCGAAGTCAACAAATTCTGACTCCCACT
TCAAGTGGCTTACAAGATCAAGAGGCTTCCCACTTTATTCAAGAGAATCAAAAGCTCCGT
GCCCAGTGCTCGGATTTTGAGAAGAGGGAGGAAGAACTTCATGGGAAGGTTAATAAGCTT
CGGAAGGAGCTTAAAGAAGCACAACGTACCTATGCGCACTTGCTAGTGGAATCAAGATTA
TTAGACAAAGTCAAGCCGGAAGACGATGTAGTTCTTTAA

Peptide Sequence

PEP ID

XP_016478595.1
PEP Infomation

PREDICTED: protein MICRORCHIDIA 6 isoform X2 [Nicotiana tabacum]
Sequence

MDPEAIRRCMSFGFSDKKSTSAIGQYGNGFKTSSMRLGADVIVFSRCTKNRKLTQSIGLL
SQTFLSRAGLDRIVVPLIDFEFSSAAGKWNSLHGEQHFVSNLSLLLRWSPFATEAELLKQ
FDDIGDHGTKVIVYNLWFNDEGKMELDFEADPEDIRLSGDANDKEKSGSRISASDLHLAN
RLRYSLRAYLSVLYLRIPDNFCILLRGRIVECHNIAKDLKYPEFIMYKPQTVGFKEGSVI
TTIGFLKEAPVVNVHGFNVYHKNRLILPFWHVVRYSDSRGRGVVGVLEANFIQPTHNKQD
FEKTPLFQKLEVRLKEMTWEYWDYHCGLIGYHPKKKPQRPITPQASSESRQQHGTYKPVL
LGKNSFSAVGPITPQASLESRQQHCSYKPVFLGKHSSGAVGSNITVRGTVTPVFQNNSRQ
GASKRKEADRPIEQESLKRTAGLVVDLTGGGRSQQILTPTSSGLQDQEASHFIQENQKLR
AQCSDFEKREEELHGKVNKLRKELKEAQRTYAHLLVESRLLDKVKPEDDVVL

Transcript Sequence

Gene sequence data has not been registered.